{ "openapi": "3.0.1", "info": { "title": "NCI GDC Cancer Genomics Scraper", "description": "Scrapes NCI Genomic Data Commons public endpoints for projects, cases, files, or annotations. Returns flat records with filters for primary site and program.", "version": "0.0", "x-build-id": "hy3cFsVLco5FQoGVI" }, "servers": [ { "url": "https://api.apify.com/v2" } ], "paths": { "/acts/parseforge~nci-gdc-cancer-scraper/run-sync-get-dataset-items": { "post": { "operationId": "run-sync-get-dataset-items-parseforge-nci-gdc-cancer-scraper", "x-openai-isConsequential": false, "summary": "Executes an Actor, waits for its completion, and returns Actor's dataset items in response.", "tags": [ "Run Actor" ], "requestBody": { "required": true, "content": { "application/json": { "schema": { "$ref": "#/components/schemas/inputSchema" } } } }, "parameters": [ { "name": "token", "in": "query", "required": true, "schema": { "type": "string" }, "description": "Enter your Apify token here" } ], "responses": { "200": { "description": "OK" } } } }, "/acts/parseforge~nci-gdc-cancer-scraper/runs": { "post": { "operationId": "runs-sync-parseforge-nci-gdc-cancer-scraper", "x-openai-isConsequential": false, "summary": "Executes an Actor and returns information about the initiated run in response.", "tags": [ "Run Actor" ], "requestBody": { "required": true, "content": { "application/json": { "schema": { "$ref": "#/components/schemas/inputSchema" } } } }, "parameters": [ { "name": "token", "in": "query", "required": true, "schema": { "type": "string" }, "description": "Enter your Apify token here" } ], "responses": { "200": { "description": "OK", "content": { "application/json": { "schema": { "$ref": "#/components/schemas/runsResponseSchema" } } } } } } }, "/acts/parseforge~nci-gdc-cancer-scraper/run-sync": { "post": { "operationId": "run-sync-parseforge-nci-gdc-cancer-scraper", "x-openai-isConsequential": false, "summary": "Executes an Actor, waits for completion, and returns the OUTPUT from Key-value store in response.", "tags": [ "Run Actor" ], "requestBody": { "required": true, "content": { "application/json": { "schema": { "$ref": "#/components/schemas/inputSchema" } } } }, "parameters": [ { "name": "token", "in": "query", "required": true, "schema": { "type": "string" }, "description": "Enter your Apify token here" } ], "responses": { "200": { "description": "OK" } } } } }, "components": { "schemas": { "inputSchema": { "type": "object", "properties": { "entity": { "title": "Entity", "enum": [ "projects", "cases", "files", "annotations" ], "type": "string", "description": "Which GDC public endpoint to scrape.", "default": "projects" }, "maxItems": { "title": "Maximum records", "minimum": 1, "maximum": 1000000, "type": "integer", "description": "How many records to collect per run." }, "primarySite": { "title": "Primary Site", "enum": [ "", "Adrenal gland", "Anus and anal canal", "Base of tongue", "Bladder", "Bones, joints and articular cartilage of limbs", "Bones, joints and articular cartilage of other and unspecified sites", "Brain", "Breast", "Bronchus and lung", "Cervix uteri", "Colon", "Connective, subcutaneous and other soft tissues", "Corpus uteri", "Esophagus", "Eye and adnexa", "Gallbladder", "Heart, mediastinum, and pleura", "Hematopoietic and reticuloendothelial systems", "Kidney", "Larynx", "Lip", "Liver and intrahepatic bile ducts", "Lymph nodes", "Meninges", "Nasal cavity and middle ear", "Nasopharynx", "Oropharynx", "Other and ill-defined sites", "Other and unspecified parts of mouth", "Other and unspecified parts of tongue", "Ovary", "Pancreas", "Penis", "Peripheral nerves and autonomic nervous system", "Prostate gland", "Rectum", "Rectosigmoid junction", "Renal pelvis", "Retroperitoneum and peritoneum", "Skin", "Small intestine", "Spinal cord, cranial nerves, and other parts of central nervous system", "Stomach", "Testis", "Thymus", "Thyroid gland", "Tonsil", "Trachea", "Ureter", "Uterus, NOS", "Vagina", "Vulva" ], "type": "string", "description": "Filter records by primary tumour / tissue site. Leave empty for all sites.", "default": "" }, "program": { "title": "Program", "enum": [ "", "ALCHEMIST", "APOLLO", "BEATAML1.0", "CCDI", "CCG", "CDDP_EAGLE", "CGCI", "CMI", "CPTAC", "CTSP", "EXCEPTIONAL_RESPONDERS", "FM", "HCMI", "MATCH", "MMRF", "MP2PRT", "NCICCR", "OHSU", "ORGANOID", "RC", "REBC", "TARGET", "TCGA", "TRIO", "VAREPOP", "WCDT" ], "type": "string", "description": "Filter by NCI cancer program. Leave empty for all programs.", "default": "" } } }, "runsResponseSchema": { "type": "object", "properties": { "data": { "type": "object", "properties": { "id": { "type": "string" }, "actId": { "type": "string" }, "userId": { "type": "string" }, "startedAt": { "type": "string", "format": "date-time", "example": "2025-01-08T00:00:00.000Z" }, "finishedAt": { "type": "string", "format": "date-time", "example": "2025-01-08T00:00:00.000Z" }, "status": { "type": "string", "example": "READY" }, "meta": { "type": "object", "properties": { "origin": { "type": "string", "example": "API" }, "userAgent": { "type": "string" } } }, "stats": { "type": "object", "properties": { "inputBodyLen": { "type": "integer", "example": 2000 }, "rebootCount": { "type": "integer", "example": 0 }, "restartCount": { "type": "integer", "example": 0 }, "resurrectCount": { "type": "integer", "example": 0 }, "computeUnits": { "type": "integer", "example": 0 } } }, "options": { "type": "object", "properties": { "build": { "type": "string", "example": "latest" }, "timeoutSecs": { "type": "integer", "example": 300 }, "memoryMbytes": { "type": "integer", "example": 1024 }, "diskMbytes": { "type": "integer", "example": 2048 } } }, "buildId": { "type": "string" }, "defaultKeyValueStoreId": { "type": "string" }, "defaultDatasetId": { "type": "string" }, "defaultRequestQueueId": { "type": "string" }, "buildNumber": { "type": "string", "example": "1.0.0" }, "containerUrl": { "type": "string" }, "usage": { "type": "object", "properties": { "ACTOR_COMPUTE_UNITS": { "type": "integer", "example": 0 }, "DATASET_READS": { "type": "integer", "example": 0 }, "DATASET_WRITES": { "type": "integer", "example": 0 }, "KEY_VALUE_STORE_READS": { "type": "integer", "example": 0 }, "KEY_VALUE_STORE_WRITES": { "type": "integer", "example": 1 }, "KEY_VALUE_STORE_LISTS": { "type": "integer", "example": 0 }, "REQUEST_QUEUE_READS": { "type": "integer", "example": 0 }, "REQUEST_QUEUE_WRITES": { "type": "integer", "example": 0 }, "DATA_TRANSFER_INTERNAL_GBYTES": { "type": "integer", "example": 0 }, "DATA_TRANSFER_EXTERNAL_GBYTES": { "type": "integer", "example": 0 }, "PROXY_RESIDENTIAL_TRANSFER_GBYTES": { "type": "integer", "example": 0 }, "PROXY_SERPS": { "type": "integer", "example": 0 } } }, "usageTotalUsd": { "type": "number", "example": 0.00005 }, "usageUsd": { "type": "object", "properties": { "ACTOR_COMPUTE_UNITS": { "type": "integer", "example": 0 }, "DATASET_READS": { "type": "integer", "example": 0 }, "DATASET_WRITES": { "type": "integer", "example": 0 }, "KEY_VALUE_STORE_READS": { "type": "integer", "example": 0 }, "KEY_VALUE_STORE_WRITES": { "type": "number", "example": 0.00005 }, "KEY_VALUE_STORE_LISTS": { "type": "integer", "example": 0 }, "REQUEST_QUEUE_READS": { "type": "integer", "example": 0 }, "REQUEST_QUEUE_WRITES": { "type": "integer", "example": 0 }, "DATA_TRANSFER_INTERNAL_GBYTES": { "type": "integer", "example": 0 }, "DATA_TRANSFER_EXTERNAL_GBYTES": { "type": "integer", "example": 0 }, "PROXY_RESIDENTIAL_TRANSFER_GBYTES": { "type": "integer", "example": 0 }, "PROXY_SERPS": { "type": "integer", "example": 0 } } } } } } } } } }